HeteroGenius Medical Image Manager (aka "MIM") is a modular system. In addition to the basic and pro core systems (see here for a comparison of features, and bundled add-ons), there are a number of add-on modules available that extend analysis functionality.

• Colour Analysis - Build models of colour (e.g IHC, Sirius Red, or tissue vs. background) and use these to quantify staining, or annotate tissue..
• 3D Pathology - stack serial sections to form a three dimensional data set correcting for sample deformation and colour variation.
• Multi-stain alignment align serial sections stained with multiple stains including 3D stacks. Any number of stain combinations are supported.
• Pathology:Radiology Correlation align single, or multiple stacked, virtual slides to radiology data in DICOM or other standard formats.
• Cell Analysis detect and classify cells in whole slides and summarise statistics visually for whole slides and local sub-regions..
• Deep Learning automatically annotate and/or quantify tissue type at high resolution based on appearance learned from annotated examples.
• Tissue Micro Array Analysis automatically annotate and label TMA cores.
• Stereology manually quantify tissue by generating grids of points or regions and using hotkey based tagging to quantify or score each point or region.